Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Samm50Q8BGH2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Gm22240-201ENSMUST00000175225 82 ntBASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Samm50Q8BGH2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Samm50Q8BGH2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Samm50Q8BGH2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Samm50Q8BGH2 Flg-201ENSMUST00000050758 1488 ntBASIC20.46■□□□□ 0.87
Samm50Q8BGH2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Samm50Q8BGH2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.46■□□□□ 0.87
Samm50Q8BGH2 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.46■□□□□ 0.87
Samm50Q8BGH2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Idnk-204ENSMUST00000226010 1898 ntBASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.45■□□□□ 0.86
Samm50Q8BGH2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Samm50Q8BGH2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.43■□□□□ 0.86
Samm50Q8BGH2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Samm50Q8BGH2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms