Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm3Q80WV7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Srrm3Q80WV7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Srrm3Q80WV7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Gm5408-201ENSMUST00000197998 747 ntBASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Gm20049-201ENSMUST00000219950 730 ntBASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm3Q80WV7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm3Q80WV7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms