Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim36Q80WG7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim36Q80WG7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim36Q80WG7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Gm22240-201ENSMUST00000175225 82 ntBASIC16.87■□□□□ 0.29
Trim36Q80WG7 Gm37856-201ENSMUST00000191634 999 ntBASIC16.87■□□□□ 0.29
Trim36Q80WG7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Rab3c-203ENSMUST00000224180 967 ntBASIC16.87■□□□□ 0.29
Trim36Q80WG7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.87■□□□□ 0.29
Trim36Q80WG7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim36Q80WG7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.86■□□□□ 0.29
Trim36Q80WG7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim36Q80WG7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.85■□□□□ 0.29
Trim36Q80WG7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim36Q80WG7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim36Q80WG7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim36Q80WG7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim36Q80WG7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim36Q80WG7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim36Q80WG7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim36Q80WG7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim36Q80WG7 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.84■□□□□ 0.29
Trim36Q80WG7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim36Q80WG7 Gm8520-201ENSMUST00000186517 868 ntBASIC16.84■□□□□ 0.29
Trim36Q80WG7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms