Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trim62Q80V85 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim62Q80V85 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim62Q80V85 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim62Q80V85 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.1■□□□□ 0.49
Trim62Q80V85 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim62Q80V85 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim62Q80V85 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim62Q80V85 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim62Q80V85 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Trim62Q80V85 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trim62Q80V85 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.1■□□□□ 0.49
Trim62Q80V85 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim62Q80V85 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim62Q80V85 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim62Q80V85 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim62Q80V85 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim62Q80V85 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.1■□□□□ 0.49
Trim62Q80V85 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.09■□□□□ 0.49
Trim62Q80V85 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim62Q80V85 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Trim62Q80V85 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim62Q80V85 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim62Q80V85 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim62Q80V85 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim62Q80V85 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim62Q80V85 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim62Q80V85 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.08■□□□□ 0.48
Trim62Q80V85 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim62Q80V85 Gm37025-201ENSMUST00000195159 829 ntBASIC18.08■□□□□ 0.48
Trim62Q80V85 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim62Q80V85 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim62Q80V85 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trim62Q80V85 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim62Q80V85 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim62Q80V85 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim62Q80V85 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim62Q80V85 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Trim62Q80V85 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim62Q80V85 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim62Q80V85 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.07■□□□□ 0.48
Trim62Q80V85 Gm38027-201ENSMUST00000192315 235 ntBASIC18.07■□□□□ 0.48
Trim62Q80V85 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.07■□□□□ 0.48
Trim62Q80V85 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim62Q80V85 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trim62Q80V85 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim62Q80V85 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.06■□□□□ 0.48
Trim62Q80V85 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim62Q80V85 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.06■□□□□ 0.48
Trim62Q80V85 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trim62Q80V85 Gm37055-201ENSMUST00000191866 133 ntBASIC18.06■□□□□ 0.48
Trim62Q80V85 Gm10252-201ENSMUST00000209541 832 ntBASIC18.06■□□□□ 0.48
Trim62Q80V85 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim62Q80V85 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim62Q80V85 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim62Q80V85 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim62Q80V85 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim62Q80V85 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim62Q80V85 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim62Q80V85 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim62Q80V85 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim62Q80V85 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim62Q80V85 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim62Q80V85 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim62Q80V85 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim62Q80V85 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim62Q80V85 Gm3375-201ENSMUST00000203929 796 ntBASIC18.05■□□□□ 0.48
Trim62Q80V85 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim62Q80V85 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim62Q80V85 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms