Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Gm22697-201ENSMUST00000175194 63 ntBASIC16.1■□□□□ 0.17
Pif1Q80SX8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Gm33142-201ENSMUST00000193913 867 ntBASIC16.09■□□□□ 0.17
Pif1Q80SX8 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.09■□□□□ 0.17
Pif1Q80SX8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pif1Q80SX8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
Pif1Q80SX8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pif1Q80SX8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.08■□□□□ 0.16
Pif1Q80SX8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pif1Q80SX8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pif1Q80SX8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pif1Q80SX8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.06■□□□□ 0.16
Pif1Q80SX8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.06■□□□□ 0.16
Pif1Q80SX8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pif1Q80SX8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pif1Q80SX8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms