Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Gm13559-201ENSMUST00000120476 863 ntBASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh8Q7TSK3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh8Q7TSK3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh8Q7TSK3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Gm7889-201ENSMUST00000185591 958 ntBASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh8Q7TSK3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh8Q7TSK3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh8Q7TSK3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh8Q7TSK3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdh8Q7TSK3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh8Q7TSK3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdh8Q7TSK3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdh8Q7TSK3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms