Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a1Q6X893 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a1Q6X893 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.27■□□□□ 0.84
Slc44a1Q6X893 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Slc44a1Q6X893 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.27■□□□□ 0.84
Slc44a1Q6X893 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a1Q6X893 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a1Q6X893 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.27■□□□□ 0.84
Slc44a1Q6X893 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a1Q6X893 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a1Q6X893 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc44a1Q6X893 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Gm37025-201ENSMUST00000195159 829 ntBASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Gm5417-201ENSMUST00000079706 384 ntBASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a1Q6X893 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Slc44a1Q6X893 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Gm7638-201ENSMUST00000121348 967 ntBASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Gm17661-201ENSMUST00000170317 270 ntBASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a1Q6X893 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc44a1Q6X893 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc44a1Q6X893 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Slc44a1Q6X893 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a1Q6X893 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a1Q6X893 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a1Q6X893 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a1Q6X893 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a1Q6X893 Gm9731-201ENSMUST00000209480 747 ntBASIC20.21■□□□□ 0.83
Slc44a1Q6X893 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a1Q6X893 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc44a1Q6X893 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.21■□□□□ 0.83
Slc44a1Q6X893 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Slc44a1Q6X893 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms