Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Casc1Q6TDU8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Casc1Q6TDU8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
Casc1Q6TDU8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Casc1Q6TDU8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Casc1Q6TDU8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Gm12896-201ENSMUST00000118430 226 ntBASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Gm37856-201ENSMUST00000191634 999 ntBASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Gm2559-201ENSMUST00000201323 363 ntBASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Casc1Q6TDU8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Gm22325-201ENSMUST00000158904 308 ntBASIC20.86■□□□□ 0.93
Casc1Q6TDU8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Casc1Q6TDU8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Gm20760-201ENSMUST00000179197 648 ntBASIC20.85■□□□□ 0.93
Casc1Q6TDU8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Casc1Q6TDU8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.85■□□□□ 0.93
Casc1Q6TDU8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Casc1Q6TDU8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc1Q6TDU8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.83■□□□□ 0.93
Casc1Q6TDU8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc1Q6TDU8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc1Q6TDU8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc1Q6TDU8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.83■□□□□ 0.93
Casc1Q6TDU8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc1Q6TDU8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Casc1Q6TDU8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Casc1Q6TDU8 Gm27275-201ENSMUST00000184318 272 ntBASIC20.83■□□□□ 0.93
Casc1Q6TDU8 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.83■□□□□ 0.93
Casc1Q6TDU8 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.83■□□□□ 0.93
Casc1Q6TDU8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Casc1Q6TDU8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.83■□□□□ 0.93
Casc1Q6TDU8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Casc1Q6TDU8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Casc1Q6TDU8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Casc1Q6TDU8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.83■□□□□ 0.92
Casc1Q6TDU8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Casc1Q6TDU8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Casc1Q6TDU8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Casc1Q6TDU8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Casc1Q6TDU8 Dio3-201ENSMUST00000097228 1449 ntBASIC20.82■□□□□ 0.92
Casc1Q6TDU8 Gm8969-201ENSMUST00000199694 526 ntBASIC20.82■□□□□ 0.92
Casc1Q6TDU8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms