Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Gm25925-201ENSMUST00000158314 306 ntBASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Gm5867-201ENSMUST00000063197 592 ntBASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn10aQ6QIY3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn10aQ6QIY3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn10aQ6QIY3 Gm15372-201ENSMUST00000120729 834 ntBASIC19.84■□□□□ 0.77
Scn10aQ6QIY3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Scn10aQ6QIY3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn10aQ6QIY3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn10aQ6QIY3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn10aQ6QIY3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn10aQ6QIY3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn10aQ6QIY3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Scn10aQ6QIY3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn10aQ6QIY3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn10aQ6QIY3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Scn10aQ6QIY3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.83■□□□□ 0.77
Scn10aQ6QIY3 Gm18733-201ENSMUST00000173950 856 ntBASIC19.83■□□□□ 0.77
Scn10aQ6QIY3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn10aQ6QIY3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn10aQ6QIY3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Scn10aQ6QIY3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn10aQ6QIY3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn10aQ6QIY3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn10aQ6QIY3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn10aQ6QIY3 Gm11336-201ENSMUST00000118168 334 ntBASIC19.83■□□□□ 0.76
Scn10aQ6QIY3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scn10aQ6QIY3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn10aQ6QIY3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Scn10aQ6QIY3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.82■□□□□ 0.76
Scn10aQ6QIY3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Gm27525-201ENSMUST00000184465 107 ntBASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn10aQ6QIY3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn10aQ6QIY3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn10aQ6QIY3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn10aQ6QIY3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Scn10aQ6QIY3 Gm13186-201ENSMUST00000118031 316 ntBASIC19.8■□□□□ 0.76
Scn10aQ6QIY3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn10aQ6QIY3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn10aQ6QIY3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.8■□□□□ 0.76
Scn10aQ6QIY3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn10aQ6QIY3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn10aQ6QIY3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn10aQ6QIY3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.79■□□□□ 0.76
Scn10aQ6QIY3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn10aQ6QIY3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn10aQ6QIY3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn10aQ6QIY3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.79■□□□□ 0.76
Scn10aQ6QIY3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn10aQ6QIY3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn10aQ6QIY3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms