Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup98Q6PFD9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Mir770-201ENSMUST00000103252 94 ntBASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Gm11355-201ENSMUST00000121120 306 ntBASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nup98Q6PFD9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nup98Q6PFD9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nup98Q6PFD9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nup98Q6PFD9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nup98Q6PFD9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nup98Q6PFD9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nup98Q6PFD9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nup98Q6PFD9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nup98Q6PFD9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.65■□□□□ 0.9
Nup98Q6PFD9 Gm11950-201ENSMUST00000121615 838 ntBASIC20.65■□□□□ 0.9
Nup98Q6PFD9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup98Q6PFD9 Gm27741-201ENSMUST00000185060 237 ntBASIC20.65■□□□□ 0.9
Nup98Q6PFD9 Gm27704-201ENSMUST00000185094 107 ntBASIC20.65■□□□□ 0.9
Nup98Q6PFD9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup98Q6PFD9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup98Q6PFD9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup98Q6PFD9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.64■□□□□ 0.9
Nup98Q6PFD9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nup98Q6PFD9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nup98Q6PFD9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Nup98Q6PFD9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nup98Q6PFD9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nup98Q6PFD9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Nup98Q6PFD9 Gm14859-201ENSMUST00000117752 357 ntBASIC20.64■□□□□ 0.89
Nup98Q6PFD9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Nup98Q6PFD9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nup98Q6PFD9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nup98Q6PFD9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nup98Q6PFD9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nup98Q6PFD9 Grk6-206ENSMUST00000224995 2971 ntBASIC20.64■□□□□ 0.89
Nup98Q6PFD9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup98Q6PFD9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Gm27000-201ENSMUST00000182943 842 ntBASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup98Q6PFD9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.61■□□□□ 0.89
Nup98Q6PFD9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nup98Q6PFD9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Gm28033-201ENSMUST00000184224 96 ntBASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Gm17807-201ENSMUST00000186869 298 ntBASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup98Q6PFD9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms