Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Gm9847-201ENSMUST00000052528 599 ntBASIC18.66■□□□□ 0.58
CtifQ6PEE2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CtifQ6PEE2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CtifQ6PEE2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CtifQ6PEE2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CtifQ6PEE2 Gm7417-201ENSMUST00000192950 473 ntBASIC18.65■□□□□ 0.58
CtifQ6PEE2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CtifQ6PEE2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CtifQ6PEE2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CtifQ6PEE2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CtifQ6PEE2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CtifQ6PEE2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CtifQ6PEE2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CtifQ6PEE2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CtifQ6PEE2 Mir8112-201ENSMUST00000184382 131 ntBASIC18.64■□□□□ 0.57
CtifQ6PEE2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CtifQ6PEE2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CtifQ6PEE2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CtifQ6PEE2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.63■□□□□ 0.57
CtifQ6PEE2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.63■□□□□ 0.57
CtifQ6PEE2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CtifQ6PEE2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CtifQ6PEE2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CtifQ6PEE2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CtifQ6PEE2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CtifQ6PEE2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms