Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Prrt3Q6PE13 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC18.33■□□□□ 0.53
Prrt3Q6PE13 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prrt3Q6PE13 Gm10418-201ENSMUST00000100943 576 ntBASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Gm23634-201ENSMUST00000175071 91 ntBASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Gm7791-201ENSMUST00000219066 539 ntBASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prrt3Q6PE13 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Gm10819-201ENSMUST00000099988 561 ntBASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Prrt3Q6PE13 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prrt3Q6PE13 Rarb-207ENSMUST00000225921 2756 ntBASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Gm21362-201ENSMUST00000194272 928 ntBASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Idnk-204ENSMUST00000226010 1898 ntBASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prrt3Q6PE13 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Gm10013-201ENSMUST00000106074 672 ntBASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prrt3Q6PE13 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prrt3Q6PE13 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prrt3Q6PE13 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.28■□□□□ 0.52
Prrt3Q6PE13 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prrt3Q6PE13 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prrt3Q6PE13 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.28■□□□□ 0.52
Prrt3Q6PE13 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms