Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf220Q6PDX6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf220Q6PDX6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Gm6139-201ENSMUST00000079261 882 ntBASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf220Q6PDX6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf220Q6PDX6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf220Q6PDX6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms