Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Gm16061-201ENSMUST00000122167 857 ntBASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Gm17661-201ENSMUST00000170317 270 ntBASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Gm10819-201ENSMUST00000099988 561 ntBASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smchd1Q6P5D8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Gm10566-201ENSMUST00000086739 996 ntBASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smchd1Q6P5D8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smchd1Q6P5D8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smchd1Q6P5D8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smchd1Q6P5D8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smchd1Q6P5D8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smchd1Q6P5D8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.2■□□□□ 0.66
Smchd1Q6P5D8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smchd1Q6P5D8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smchd1Q6P5D8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smchd1Q6P5D8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smchd1Q6P5D8 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.2■□□□□ 0.66
Smchd1Q6P5D8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smchd1Q6P5D8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smchd1Q6P5D8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Rarb-207ENSMUST00000225921 2756 ntBASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Il3ra-202ENSMUST00000223589 738 ntBASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smchd1Q6P5D8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smchd1Q6P5D8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smchd1Q6P5D8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
Smchd1Q6P5D8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smchd1Q6P5D8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Smchd1Q6P5D8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.18■□□□□ 0.66
Smchd1Q6P5D8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smchd1Q6P5D8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smchd1Q6P5D8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms