Protein–RNA interactions for Protein: Q6P4S6

Sik3, Serine/threonine-protein kinase SIK3, mousemouse

Predictions only

Length 1,311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sik3Q6P4S6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sik3Q6P4S6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.88■□□□□ 0.93
Sik3Q6P4S6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sik3Q6P4S6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Gm14859-201ENSMUST00000117752 357 ntBASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Ank2-226ENSMUST00000189368 339 ntBASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sik3Q6P4S6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Sik3Q6P4S6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Gm9103-201ENSMUST00000119371 405 ntBASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sik3Q6P4S6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sik3Q6P4S6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sik3Q6P4S6 Mir8112-201ENSMUST00000184382 131 ntBASIC20.83■□□□□ 0.93
Sik3Q6P4S6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Sik3Q6P4S6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sik3Q6P4S6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.83■□□□□ 0.93
Sik3Q6P4S6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sik3Q6P4S6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sik3Q6P4S6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Sik3Q6P4S6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.83■□□□□ 0.92
Sik3Q6P4S6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sik3Q6P4S6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sik3Q6P4S6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sik3Q6P4S6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sik3Q6P4S6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms