Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Casc4Q6P2L7 Gm43183-201ENSMUST00000200632 547 ntBASIC17.67■□□□□ 0.42
Casc4Q6P2L7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.67■□□□□ 0.42
Casc4Q6P2L7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Casc4Q6P2L7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Casc4Q6P2L7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Casc4Q6P2L7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Casc4Q6P2L7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Casc4Q6P2L7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Casc4Q6P2L7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Casc4Q6P2L7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.67■□□□□ 0.42
Casc4Q6P2L7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Casc4Q6P2L7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Gm12382-201ENSMUST00000122005 922 ntBASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Casc4Q6P2L7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Casc4Q6P2L7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.64■□□□□ 0.42
Casc4Q6P2L7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Casc4Q6P2L7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Gm37292-201ENSMUST00000192062 758 ntBASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Gm29791-202ENSMUST00000207888 369 ntBASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.64■□□□□ 0.41
Casc4Q6P2L7 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Idnk-204ENSMUST00000226010 1898 ntBASIC17.64■□□□□ 0.41
Casc4Q6P2L7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Casc4Q6P2L7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Casc4Q6P2L7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Casc4Q6P2L7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms