Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpm4Q6IRU2 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpm4Q6IRU2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm4Q6IRU2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm4Q6IRU2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Tpm4Q6IRU2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tpm4Q6IRU2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Tpm4Q6IRU2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Gm6365-201ENSMUST00000054711 744 ntBASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm4Q6IRU2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Tpm4Q6IRU2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms