Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col7a1Q63870 Gm12260-201ENSMUST00000122447 411 ntBASIC14.57□□□□□ -0.08
Col7a1Q63870 Rprl3-201ENSMUST00000157400 290 ntBASIC14.57□□□□□ -0.08
Col7a1Q63870 Gm27867-201ENSMUST00000184778 125 ntBASIC14.57□□□□□ -0.08
Col7a1Q63870 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Col7a1Q63870 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.57□□□□□ -0.08
Col7a1Q63870 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col7a1Q63870 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col7a1Q63870 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col7a1Q63870 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col7a1Q63870 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col7a1Q63870 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col7a1Q63870 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col7a1Q63870 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col7a1Q63870 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col7a1Q63870 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.56□□□□□ -0.08
Col7a1Q63870 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col7a1Q63870 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col7a1Q63870 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col7a1Q63870 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col7a1Q63870 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col7a1Q63870 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.56□□□□□ -0.08
Col7a1Q63870 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.56□□□□□ -0.08
Col7a1Q63870 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Col7a1Q63870 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col7a1Q63870 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col7a1Q63870 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.56□□□□□ -0.08
Col7a1Q63870 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col7a1Q63870 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col7a1Q63870 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col7a1Q63870 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col7a1Q63870 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
Col7a1Q63870 Mir6956-201ENSMUST00000183598 62 ntBASIC14.55□□□□□ -0.08
Col7a1Q63870 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.55□□□□□ -0.08
Col7a1Q63870 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col7a1Q63870 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col7a1Q63870 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.55□□□□□ -0.08
Col7a1Q63870 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col7a1Q63870 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Col7a1Q63870 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col7a1Q63870 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col7a1Q63870 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.54□□□□□ -0.08
Col7a1Q63870 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col7a1Q63870 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col7a1Q63870 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col7a1Q63870 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.54□□□□□ -0.08
Col7a1Q63870 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.54□□□□□ -0.08
Col7a1Q63870 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col7a1Q63870 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col7a1Q63870 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.54□□□□□ -0.08
Col7a1Q63870 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col7a1Q63870 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col7a1Q63870 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.54□□□□□ -0.08
Col7a1Q63870 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.54□□□□□ -0.08
Col7a1Q63870 Gm5745-201ENSMUST00000183748 313 ntBASIC14.54□□□□□ -0.08
Col7a1Q63870 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col7a1Q63870 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.54□□□□□ -0.08
Col7a1Q63870 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.54□□□□□ -0.08
Col7a1Q63870 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.53□□□□□ -0.08
Col7a1Q63870 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col7a1Q63870 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col7a1Q63870 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC14.53□□□□□ -0.08
Col7a1Q63870 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 Gm7230-201ENSMUST00000173026 815 ntBASIC14.53□□□□□ -0.08
Col7a1Q63870 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.53□□□□□ -0.08
Col7a1Q63870 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.53□□□□□ -0.08
Col7a1Q63870 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col7a1Q63870 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.53□□□□□ -0.08
Col7a1Q63870 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col7a1Q63870 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col7a1Q63870 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.52□□□□□ -0.08
Col7a1Q63870 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col7a1Q63870 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col7a1Q63870 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col7a1Q63870 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col7a1Q63870 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.52□□□□□ -0.09
Col7a1Q63870 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col7a1Q63870 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.52□□□□□ -0.09
Col7a1Q63870 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col7a1Q63870 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.52□□□□□ -0.09
Col7a1Q63870 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col7a1Q63870 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Col7a1Q63870 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col7a1Q63870 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col7a1Q63870 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col7a1Q63870 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col7a1Q63870 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Col7a1Q63870 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col7a1Q63870 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms