Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Six2Q62232 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six2Q62232 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six2Q62232 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six2Q62232 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six2Q62232 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.63■□□□□ 0.57
Six2Q62232 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.63■□□□□ 0.57
Six2Q62232 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six2Q62232 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.63■□□□□ 0.57
Six2Q62232 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Six2Q62232 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Six2Q62232 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six2Q62232 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.62■□□□□ 0.57
Six2Q62232 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Six2Q62232 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.62■□□□□ 0.57
Six2Q62232 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Six2Q62232 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Six2Q62232 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Six2Q62232 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six2Q62232 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six2Q62232 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Six2Q62232 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Six2Q62232 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Six2Q62232 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.61■□□□□ 0.57
Six2Q62232 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Six2Q62232 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six2Q62232 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Six2Q62232 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six2Q62232 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six2Q62232 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six2Q62232 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Six2Q62232 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six2Q62232 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.6■□□□□ 0.57
Six2Q62232 Gm12382-201ENSMUST00000122005 922 ntBASIC18.6■□□□□ 0.57
Six2Q62232 Gm4974-201ENSMUST00000209974 875 ntBASIC18.6■□□□□ 0.57
Six2Q62232 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six2Q62232 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Six2Q62232 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six2Q62232 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six2Q62232 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six2Q62232 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six2Q62232 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six2Q62232 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Six2Q62232 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.59■□□□□ 0.57
Six2Q62232 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.59■□□□□ 0.57
Six2Q62232 Gm10517-202ENSMUST00000192970 758 ntBASIC18.59■□□□□ 0.57
Six2Q62232 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six2Q62232 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Six2Q62232 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Six2Q62232 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Six2Q62232 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Six2Q62232 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Six2Q62232 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Six2Q62232 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six2Q62232 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six2Q62232 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.58■□□□□ 0.56
Six2Q62232 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.58■□□□□ 0.56
Six2Q62232 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six2Q62232 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Six2Q62232 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six2Q62232 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
Six2Q62232 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six2Q62232 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six2Q62232 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Six2Q62232 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Six2Q62232 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Six2Q62232 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six2Q62232 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Six2Q62232 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six2Q62232 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.57■□□□□ 0.56
Six2Q62232 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.57■□□□□ 0.56
Six2Q62232 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six2Q62232 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six2Q62232 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Six2Q62232 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Six2Q62232 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Six2Q62232 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six2Q62232 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six2Q62232 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six2Q62232 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six2Q62232 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six2Q62232 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms