Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctr9Q62018 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctr9Q62018 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctr9Q62018 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ctr9Q62018 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ctr9Q62018 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ctr9Q62018 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctr9Q62018 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ctr9Q62018 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.58■□□□□ 0.89
Ctr9Q62018 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.58■□□□□ 0.89
Ctr9Q62018 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ctr9Q62018 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ctr9Q62018 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ctr9Q62018 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ctr9Q62018 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ctr9Q62018 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ctr9Q62018 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ctr9Q62018 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ctr9Q62018 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ctr9Q62018 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.57■□□□□ 0.88
Ctr9Q62018 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ctr9Q62018 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ctr9Q62018 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.57■□□□□ 0.88
Ctr9Q62018 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.57■□□□□ 0.88
Ctr9Q62018 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Ctr9Q62018 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctr9Q62018 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctr9Q62018 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctr9Q62018 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctr9Q62018 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ctr9Q62018 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ctr9Q62018 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctr9Q62018 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctr9Q62018 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctr9Q62018 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ctr9Q62018 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctr9Q62018 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctr9Q62018 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ctr9Q62018 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ctr9Q62018 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.55■□□□□ 0.88
Ctr9Q62018 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.55■□□□□ 0.88
Ctr9Q62018 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ctr9Q62018 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.55■□□□□ 0.88
Ctr9Q62018 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.55■□□□□ 0.88
Ctr9Q62018 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctr9Q62018 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ctr9Q62018 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ctr9Q62018 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ctr9Q62018 Mir8112-201ENSMUST00000184382 131 ntBASIC20.54■□□□□ 0.88
Ctr9Q62018 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Ctr9Q62018 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.54■□□□□ 0.88
Ctr9Q62018 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.54■□□□□ 0.88
Ctr9Q62018 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.54■□□□□ 0.88
Ctr9Q62018 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.54■□□□□ 0.88
Ctr9Q62018 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ctr9Q62018 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.54■□□□□ 0.88
Ctr9Q62018 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Ctr9Q62018 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctr9Q62018 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctr9Q62018 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ctr9Q62018 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.53■□□□□ 0.88
Ctr9Q62018 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctr9Q62018 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms