Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Irf9Q61179 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Irf9Q61179 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Irf9Q61179 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Irf9Q61179 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Irf9Q61179 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Irf9Q61179 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.76■■□□□ 1.07
Irf9Q61179 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.76■■□□□ 1.07
Irf9Q61179 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.76■■□□□ 1.07
Irf9Q61179 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Irf9Q61179 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.76■■□□□ 1.07
Irf9Q61179 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Irf9Q61179 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Irf9Q61179 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Irf9Q61179 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf9Q61179 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Irf9Q61179 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Irf9Q61179 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf9Q61179 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Irf9Q61179 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.75■■□□□ 1.07
Irf9Q61179 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Irf9Q61179 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf9Q61179 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Irf9Q61179 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf9Q61179 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Irf9Q61179 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf9Q61179 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Irf9Q61179 Gm10013-201ENSMUST00000106074 672 ntBASIC21.74■■□□□ 1.07
Irf9Q61179 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf9Q61179 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Irf9Q61179 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Irf9Q61179 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.74■■□□□ 1.07
Irf9Q61179 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.74■■□□□ 1.07
Irf9Q61179 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Irf9Q61179 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Irf9Q61179 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf9Q61179 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf9Q61179 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf9Q61179 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf9Q61179 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Irf9Q61179 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.73■■□□□ 1.07
Irf9Q61179 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf9Q61179 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf9Q61179 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Irf9Q61179 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf9Q61179 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.73■■□□□ 1.07
Irf9Q61179 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Irf9Q61179 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Irf9Q61179 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf9Q61179 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf9Q61179 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf9Q61179 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Irf9Q61179 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Irf9Q61179 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Irf9Q61179 Gm13474-201ENSMUST00000122466 815 ntBASIC21.72■■□□□ 1.07
Irf9Q61179 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.72■■□□□ 1.07
Irf9Q61179 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.72■■□□□ 1.07
Irf9Q61179 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf9Q61179 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Irf9Q61179 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.72■■□□□ 1.07
Irf9Q61179 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf9Q61179 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Irf9Q61179 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf9Q61179 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Irf9Q61179 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Irf9Q61179 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.71■■□□□ 1.07
Irf9Q61179 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf9Q61179 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Irf9Q61179 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf9Q61179 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf9Q61179 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf9Q61179 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Irf9Q61179 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf9Q61179 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf9Q61179 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Irf9Q61179 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.71■■□□□ 1.07
Irf9Q61179 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.7■■□□□ 1.06
Irf9Q61179 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf9Q61179 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf9Q61179 Gm22697-201ENSMUST00000175194 63 ntBASIC21.7■■□□□ 1.06
Irf9Q61179 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Irf9Q61179 Gm18101-201ENSMUST00000215769 548 ntBASIC21.7■■□□□ 1.06
Irf9Q61179 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.7■■□□□ 1.06
Irf9Q61179 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf9Q61179 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf9Q61179 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf9Q61179 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Irf9Q61179 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Irf9Q61179 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms