Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NfkbibQ60778 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NfkbibQ60778 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NfkbibQ60778 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.04■□□□□ 0.96
NfkbibQ60778 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NfkbibQ60778 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.04■□□□□ 0.96
NfkbibQ60778 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.04■□□□□ 0.96
NfkbibQ60778 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
NfkbibQ60778 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NfkbibQ60778 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.04■□□□□ 0.96
NfkbibQ60778 Gm8969-201ENSMUST00000199694 526 ntBASIC21.04■□□□□ 0.96
NfkbibQ60778 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.04■□□□□ 0.96
NfkbibQ60778 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NfkbibQ60778 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NfkbibQ60778 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NfkbibQ60778 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NfkbibQ60778 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NfkbibQ60778 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.03■□□□□ 0.96
NfkbibQ60778 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NfkbibQ60778 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.03■□□□□ 0.96
NfkbibQ60778 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.03■□□□□ 0.96
NfkbibQ60778 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NfkbibQ60778 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.03■□□□□ 0.96
NfkbibQ60778 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NfkbibQ60778 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NfkbibQ60778 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NfkbibQ60778 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NfkbibQ60778 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NfkbibQ60778 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NfkbibQ60778 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NfkbibQ60778 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NfkbibQ60778 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NfkbibQ60778 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NfkbibQ60778 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NfkbibQ60778 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NfkbibQ60778 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NfkbibQ60778 Gm2274-201ENSMUST00000184539 609 ntBASIC21.02■□□□□ 0.96
NfkbibQ60778 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
NfkbibQ60778 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.02■□□□□ 0.96
NfkbibQ60778 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.02■□□□□ 0.96
NfkbibQ60778 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NfkbibQ60778 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NfkbibQ60778 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NfkbibQ60778 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NfkbibQ60778 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NfkbibQ60778 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
NfkbibQ60778 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NfkbibQ60778 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.01■□□□□ 0.95
NfkbibQ60778 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NfkbibQ60778 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.01■□□□□ 0.95
NfkbibQ60778 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NfkbibQ60778 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NfkbibQ60778 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NfkbibQ60778 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NfkbibQ60778 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NfkbibQ60778 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NfkbibQ60778 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21■□□□□ 0.95
NfkbibQ60778 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NfkbibQ60778 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
NfkbibQ60778 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21■□□□□ 0.95
NfkbibQ60778 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21■□□□□ 0.95
NfkbibQ60778 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NfkbibQ60778 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NfkbibQ60778 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21■□□□□ 0.95
NfkbibQ60778 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NfkbibQ60778 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NfkbibQ60778 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
NfkbibQ60778 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NfkbibQ60778 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NfkbibQ60778 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NfkbibQ60778 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
NfkbibQ60778 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NfkbibQ60778 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NfkbibQ60778 Gm45058-201ENSMUST00000205810 766 ntBASIC20.99■□□□□ 0.95
NfkbibQ60778 Gm18959-201ENSMUST00000208954 655 ntBASIC20.99■□□□□ 0.95
NfkbibQ60778 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NfkbibQ60778 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NfkbibQ60778 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NfkbibQ60778 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NfkbibQ60778 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NfkbibQ60778 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NfkbibQ60778 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NfkbibQ60778 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NfkbibQ60778 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NfkbibQ60778 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NfkbibQ60778 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NfkbibQ60778 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.98■□□□□ 0.95
NfkbibQ60778 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NfkbibQ60778 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NfkbibQ60778 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NfkbibQ60778 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NfkbibQ60778 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.97■□□□□ 0.95
NfkbibQ60778 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NfkbibQ60778 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
NfkbibQ60778 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NfkbibQ60778 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.97■□□□□ 0.95
NfkbibQ60778 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NfkbibQ60778 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NfkbibQ60778 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NfkbibQ60778 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms