Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctc1Q5SUQ9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.51■□□□□ 0.55
Ctc1Q5SUQ9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Mir8112-201ENSMUST00000184382 131 ntBASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctc1Q5SUQ9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Gm6433-201ENSMUST00000118634 875 ntBASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Mir2861-201ENSMUST00000175539 82 ntBASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Gm29791-202ENSMUST00000207888 369 ntBASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ctc1Q5SUQ9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ctc1Q5SUQ9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ctc1Q5SUQ9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ctc1Q5SUQ9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ctc1Q5SUQ9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ctc1Q5SUQ9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Gm5417-201ENSMUST00000079706 384 ntBASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.45■□□□□ 0.54
Ctc1Q5SUQ9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms