Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.3■□□□□ 0.36
Scn2bQ56A07 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn2bQ56A07 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.3■□□□□ 0.36
Scn2bQ56A07 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.3■□□□□ 0.36
Scn2bQ56A07 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.3■□□□□ 0.36
Scn2bQ56A07 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn2bQ56A07 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Scn2bQ56A07 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn2bQ56A07 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.28■□□□□ 0.36
Scn2bQ56A07 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.28■□□□□ 0.36
Scn2bQ56A07 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.28■□□□□ 0.36
Scn2bQ56A07 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn2bQ56A07 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.27■□□□□ 0.36
Scn2bQ56A07 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Gm26524-201ENSMUST00000192339 390 ntBASIC17.27■□□□□ 0.36
Scn2bQ56A07 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.27■□□□□ 0.36
Scn2bQ56A07 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.27■□□□□ 0.36
Scn2bQ56A07 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn2bQ56A07 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Scn2bQ56A07 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Scn2bQ56A07 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn2bQ56A07 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn2bQ56A07 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn2bQ56A07 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn2bQ56A07 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms