Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm4Q4VBF2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm4Q4VBF2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
R3hdm4Q4VBF2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm4Q4VBF2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm4Q4VBF2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm4Q4VBF2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
R3hdm4Q4VBF2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.83■□□□□ 0.61
R3hdm4Q4VBF2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm4Q4VBF2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm4Q4VBF2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Gm5417-201ENSMUST00000079706 384 ntBASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm4Q4VBF2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Gm38027-201ENSMUST00000192315 235 ntBASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Odf3b-204ENSMUST00000227834 930 ntBASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm4Q4VBF2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Gm8969-201ENSMUST00000199694 526 ntBASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hdm4Q4VBF2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
R3hdm4Q4VBF2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
R3hdm4Q4VBF2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hdm4Q4VBF2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hdm4Q4VBF2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.78■□□□□ 0.6
R3hdm4Q4VBF2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hdm4Q4VBF2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
R3hdm4Q4VBF2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
R3hdm4Q4VBF2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hdm4Q4VBF2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.78■□□□□ 0.6
R3hdm4Q4VBF2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms