Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx49Q4FZF3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx49Q4FZF3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.27■□□□□ 0.84
Ddx49Q4FZF3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ddx49Q4FZF3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx49Q4FZF3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx49Q4FZF3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Gm11355-201ENSMUST00000121120 306 ntBASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx49Q4FZF3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx49Q4FZF3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Gm11950-201ENSMUST00000121615 838 ntBASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ddx49Q4FZF3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Mir3081-201ENSMUST00000175305 84 ntBASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Gm9731-201ENSMUST00000209480 747 ntBASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx49Q4FZF3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Gm10418-201ENSMUST00000100943 576 ntBASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.21■□□□□ 0.83
Ddx49Q4FZF3 Il3ra-202ENSMUST00000223589 738 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms