Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf38aQ4FK66 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf38aQ4FK66 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf38aQ4FK66 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Prpf38aQ4FK66 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Prpf38aQ4FK66 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf38aQ4FK66 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf38aQ4FK66 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf38aQ4FK66 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf38aQ4FK66 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf38aQ4FK66 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf38aQ4FK66 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.39■□□□□ 0.85
Prpf38aQ4FK66 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf38aQ4FK66 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.39■□□□□ 0.85
Prpf38aQ4FK66 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Prpf38aQ4FK66 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf38aQ4FK66 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.39■□□□□ 0.85
Prpf38aQ4FK66 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf38aQ4FK66 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Gm10013-201ENSMUST00000106074 672 ntBASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf38aQ4FK66 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Gm13474-201ENSMUST00000122466 815 ntBASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf38aQ4FK66 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Gm17661-201ENSMUST00000170317 270 ntBASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf38aQ4FK66 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Gm7370-201ENSMUST00000219471 767 ntBASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38aQ4FK66 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
Prpf38aQ4FK66 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf38aQ4FK66 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Prpf38aQ4FK66 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf38aQ4FK66 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf38aQ4FK66 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.33■□□□□ 0.85
Prpf38aQ4FK66 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms