Protein–RNA interactions for Protein: Q499D0

Foxn3, Forkhead box protein N3, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn3Q499D0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxn3Q499D0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Gm5643-201ENSMUST00000117081 966 ntBASIC19.24■□□□□ 0.67
Foxn3Q499D0 Gm18666-201ENSMUST00000190039 958 ntBASIC19.24■□□□□ 0.67
Foxn3Q499D0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Foxn3Q499D0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.24■□□□□ 0.67
Foxn3Q499D0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Foxn3Q499D0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.23■□□□□ 0.67
Foxn3Q499D0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxn3Q499D0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Foxn3Q499D0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Foxn3Q499D0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxn3Q499D0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxn3Q499D0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Foxn3Q499D0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxn3Q499D0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Foxn3Q499D0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Foxn3Q499D0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxn3Q499D0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxn3Q499D0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxn3Q499D0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Foxn3Q499D0 Gm10653-202ENSMUST00000139570 835 ntBASIC19.21■□□□□ 0.67
Foxn3Q499D0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxn3Q499D0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxn3Q499D0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxn3Q499D0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxn3Q499D0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Foxn3Q499D0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxn3Q499D0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxn3Q499D0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Foxn3Q499D0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Foxn3Q499D0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Gm43183-201ENSMUST00000200632 547 ntBASIC19.19■□□□□ 0.66
Foxn3Q499D0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxn3Q499D0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxn3Q499D0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Foxn3Q499D0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Foxn3Q499D0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms