Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Gm28047Q3US59 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Gm28047Q3US59 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28047Q3US59 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28047Q3US59 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Gm13158-201ENSMUST00000122007 736 ntBASIC19.9■□□□□ 0.78
Gm28047Q3US59 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Gm6576-201ENSMUST00000169678 883 ntBASIC19.9■□□□□ 0.78
Gm28047Q3US59 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.9■□□□□ 0.78
Gm28047Q3US59 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.9■□□□□ 0.78
Gm28047Q3US59 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.9■□□□□ 0.78
Gm28047Q3US59 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28047Q3US59 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Gm28047Q3US59 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Gm28047Q3US59 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Gm28047Q3US59 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.89■□□□□ 0.77
Gm28047Q3US59 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28047Q3US59 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28047Q3US59 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.88■□□□□ 0.77
Gm28047Q3US59 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28047Q3US59 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28047Q3US59 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28047Q3US59 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28047Q3US59 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28047Q3US59 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28047Q3US59 Gm27275-201ENSMUST00000184318 272 ntBASIC19.88■□□□□ 0.77
Gm28047Q3US59 Gm20049-201ENSMUST00000219950 730 ntBASIC19.88■□□□□ 0.77
Gm28047Q3US59 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28047Q3US59 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28047Q3US59 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Gm28047Q3US59 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28047Q3US59 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.87■□□□□ 0.77
Gm28047Q3US59 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.87■□□□□ 0.77
Gm28047Q3US59 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28047Q3US59 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm28047Q3US59 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Gm12441-201ENSMUST00000121806 588 ntBASIC19.86■□□□□ 0.77
Gm28047Q3US59 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.86■□□□□ 0.77
Gm28047Q3US59 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28047Q3US59 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28047Q3US59 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28047Q3US59 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28047Q3US59 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Gm28047Q3US59 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms