Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Lins1Q3U1D0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.78■□□□□ 0.92
Lins1Q3U1D0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lins1Q3U1D0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lins1Q3U1D0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lins1Q3U1D0 Gm10418-201ENSMUST00000100943 576 ntBASIC20.78■□□□□ 0.92
Lins1Q3U1D0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lins1Q3U1D0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lins1Q3U1D0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.78■□□□□ 0.92
Lins1Q3U1D0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lins1Q3U1D0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lins1Q3U1D0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lins1Q3U1D0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lins1Q3U1D0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lins1Q3U1D0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lins1Q3U1D0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.77■□□□□ 0.92
Lins1Q3U1D0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lins1Q3U1D0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lins1Q3U1D0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.77■□□□□ 0.92
Lins1Q3U1D0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lins1Q3U1D0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lins1Q3U1D0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lins1Q3U1D0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lins1Q3U1D0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Gm10819-201ENSMUST00000099988 561 ntBASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.76■□□□□ 0.91
Lins1Q3U1D0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Gm13401-201ENSMUST00000117074 291 ntBASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Gm7367-201ENSMUST00000057611 492 ntBASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lins1Q3U1D0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Gm24841-201ENSMUST00000158676 357 ntBASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.74■□□□□ 0.91
Lins1Q3U1D0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lins1Q3U1D0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Gm7638-201ENSMUST00000121348 967 ntBASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Gm6345-202ENSMUST00000180900 204 ntBASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.73■□□□□ 0.91
Lins1Q3U1D0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms