Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nhej1Q3KNJ2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nhej1Q3KNJ2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Nhej1Q3KNJ2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nhej1Q3KNJ2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nhej1Q3KNJ2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nhej1Q3KNJ2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Gm44549-201ENSMUST00000208351 577 ntBASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nhej1Q3KNJ2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nhej1Q3KNJ2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.64■□□□□ 0.58
Nhej1Q3KNJ2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Nhej1Q3KNJ2 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.64■□□□□ 0.58
Nhej1Q3KNJ2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nhej1Q3KNJ2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nhej1Q3KNJ2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nhej1Q3KNJ2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nhej1Q3KNJ2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nhej1Q3KNJ2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nhej1Q3KNJ2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nhej1Q3KNJ2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nhej1Q3KNJ2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nhej1Q3KNJ2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.64■□□□□ 0.57
Nhej1Q3KNJ2 Flg-201ENSMUST00000050758 1488 ntBASIC18.64■□□□□ 0.57
Nhej1Q3KNJ2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.63■□□□□ 0.57
Nhej1Q3KNJ2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.62■□□□□ 0.57
Nhej1Q3KNJ2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Gm10849-201ENSMUST00000100397 618 ntBASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nhej1Q3KNJ2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nhej1Q3KNJ2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nhej1Q3KNJ2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nhej1Q3KNJ2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.6■□□□□ 0.57
Nhej1Q3KNJ2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nhej1Q3KNJ2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nhej1Q3KNJ2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms