Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Hspg2Q05793 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.92□□□□□ -0.34
Hspg2Q05793 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.92□□□□□ -0.34
Hspg2Q05793 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.92□□□□□ -0.34
Hspg2Q05793 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hspg2Q05793 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hspg2Q05793 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hspg2Q05793 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hspg2Q05793 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hspg2Q05793 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hspg2Q05793 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.91□□□□□ -0.34
Hspg2Q05793 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hspg2Q05793 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hspg2Q05793 Olfr129-201ENSMUST00000122318 993 ntBASIC12.91□□□□□ -0.34
Hspg2Q05793 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.91□□□□□ -0.34
Hspg2Q05793 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.91□□□□□ -0.34
Hspg2Q05793 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.91□□□□□ -0.34
Hspg2Q05793 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hspg2Q05793 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hspg2Q05793 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hspg2Q05793 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hspg2Q05793 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hspg2Q05793 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Mir770-201ENSMUST00000103252 94 ntBASIC12.9□□□□□ -0.34
Hspg2Q05793 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hspg2Q05793 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.9□□□□□ -0.34
Hspg2Q05793 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.9□□□□□ -0.34
Hspg2Q05793 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Hspg2Q05793 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hspg2Q05793 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.9□□□□□ -0.34
Hspg2Q05793 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.9□□□□□ -0.34
Hspg2Q05793 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hspg2Q05793 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hspg2Q05793 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hspg2Q05793 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Hspg2Q05793 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.89□□□□□ -0.35
Hspg2Q05793 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hspg2Q05793 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hspg2Q05793 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hspg2Q05793 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.89□□□□□ -0.35
Hspg2Q05793 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.89□□□□□ -0.35
Hspg2Q05793 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hspg2Q05793 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hspg2Q05793 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.89□□□□□ -0.35
Hspg2Q05793 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hspg2Q05793 Gm4974-201ENSMUST00000209974 875 ntBASIC12.89□□□□□ -0.35
Hspg2Q05793 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hspg2Q05793 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hspg2Q05793 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hspg2Q05793 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hspg2Q05793 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hspg2Q05793 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hspg2Q05793 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hspg2Q05793 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Hspg2Q05793 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Hspg2Q05793 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hspg2Q05793 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hspg2Q05793 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hspg2Q05793 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hspg2Q05793 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hspg2Q05793 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hspg2Q05793 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hspg2Q05793 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hspg2Q05793 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.87□□□□□ -0.35
Hspg2Q05793 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hspg2Q05793 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.87□□□□□ -0.35
Hspg2Q05793 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.87□□□□□ -0.35
Hspg2Q05793 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Auts2-212ENSMUST00000178555 309 ntBASIC12.87□□□□□ -0.35
Hspg2Q05793 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.87□□□□□ -0.35
Hspg2Q05793 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms