Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Six5P70178 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.36■□□□□ 0.21
Six5P70178 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six5P70178 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.35■□□□□ 0.21
Six5P70178 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Six5P70178 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Six5P70178 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.35■□□□□ 0.21
Six5P70178 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.35■□□□□ 0.21
Six5P70178 Gm43183-201ENSMUST00000200632 547 ntBASIC16.35■□□□□ 0.21
Six5P70178 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Six5P70178 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six5P70178 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.34■□□□□ 0.21
Six5P70178 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Six5P70178 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.34■□□□□ 0.21
Six5P70178 Gm27011-201ENSMUST00000182352 972 ntBASIC16.34■□□□□ 0.21
Six5P70178 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.34■□□□□ 0.21
Six5P70178 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six5P70178 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.34■□□□□ 0.21
Six5P70178 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Six5P70178 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.33■□□□□ 0.21
Six5P70178 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six5P70178 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.33■□□□□ 0.21
Six5P70178 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six5P70178 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six5P70178 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six5P70178 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six5P70178 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six5P70178 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.33■□□□□ 0.2
Six5P70178 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.33■□□□□ 0.2
Six5P70178 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six5P70178 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six5P70178 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six5P70178 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.33■□□□□ 0.2
Six5P70178 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six5P70178 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.33■□□□□ 0.2
Six5P70178 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Six5P70178 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.33■□□□□ 0.2
Six5P70178 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six5P70178 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Six5P70178 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.32■□□□□ 0.2
Six5P70178 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Six5P70178 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six5P70178 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six5P70178 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six5P70178 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six5P70178 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Six5P70178 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six5P70178 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six5P70178 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six5P70178 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Six5P70178 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six5P70178 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Six5P70178 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms