Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 Gm10517-202ENSMUST00000192970 758 ntBASIC17.29■□□□□ 0.36
Pdx1P52946 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.29■□□□□ 0.36
Pdx1P52946 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.29■□□□□ 0.36
Pdx1P52946 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdx1P52946 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdx1P52946 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdx1P52946 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pdx1P52946 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdx1P52946 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdx1P52946 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdx1P52946 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdx1P52946 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdx1P52946 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdx1P52946 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdx1P52946 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdx1P52946 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdx1P52946 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pdx1P52946 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdx1P52946 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdx1P52946 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pdx1P52946 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pdx1P52946 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdx1P52946 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Pdx1P52946 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.27■□□□□ 0.36
Pdx1P52946 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.27■□□□□ 0.36
Pdx1P52946 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
Pdx1P52946 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdx1P52946 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdx1P52946 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pdx1P52946 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdx1P52946 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.27■□□□□ 0.35
Pdx1P52946 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pdx1P52946 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.27■□□□□ 0.35
Pdx1P52946 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdx1P52946 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdx1P52946 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdx1P52946 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdx1P52946 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdx1P52946 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Pdx1P52946 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdx1P52946 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdx1P52946 Gm4974-201ENSMUST00000209974 875 ntBASIC17.26■□□□□ 0.35
Pdx1P52946 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pdx1P52946 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pdx1P52946 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdx1P52946 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.26■□□□□ 0.35
Pdx1P52946 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Pdx1P52946 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdx1P52946 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdx1P52946 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Pdx1P52946 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdx1P52946 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdx1P52946 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdx1P52946 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdx1P52946 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.25■□□□□ 0.35
Pdx1P52946 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdx1P52946 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdx1P52946 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.25■□□□□ 0.35
Pdx1P52946 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdx1P52946 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdx1P52946 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.25■□□□□ 0.35
Pdx1P52946 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Pdx1P52946 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdx1P52946 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdx1P52946 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.25■□□□□ 0.35
Pdx1P52946 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdx1P52946 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pdx1P52946 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdx1P52946 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pdx1P52946 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdx1P52946 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pdx1P52946 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdx1P52946 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdx1P52946 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Pdx1P52946 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdx1P52946 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdx1P52946 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdx1P52946 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdx1P52946 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.24■□□□□ 0.35
Pdx1P52946 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.24■□□□□ 0.35
Pdx1P52946 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.24■□□□□ 0.35
Pdx1P52946 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.24■□□□□ 0.35
Pdx1P52946 Gm8969-201ENSMUST00000199694 526 ntBASIC17.24■□□□□ 0.35
Pdx1P52946 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.24■□□□□ 0.35
Pdx1P52946 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pdx1P52946 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdx1P52946 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pdx1P52946 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdx1P52946 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdx1P52946 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pdx1P52946 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdx1P52946 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdx1P52946 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdx1P52946 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdx1P52946 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms