Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CcnfP51944 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.66■□□□□ 0.26
CcnfP51944 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.66■□□□□ 0.26
CcnfP51944 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.66■□□□□ 0.26
CcnfP51944 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CcnfP51944 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.66■□□□□ 0.26
CcnfP51944 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.66■□□□□ 0.26
CcnfP51944 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CcnfP51944 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CcnfP51944 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CcnfP51944 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CcnfP51944 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CcnfP51944 Gm38285-201ENSMUST00000192928 922 ntBASIC16.65■□□□□ 0.26
CcnfP51944 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.65■□□□□ 0.26
CcnfP51944 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.65■□□□□ 0.26
CcnfP51944 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.65■□□□□ 0.26
CcnfP51944 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CcnfP51944 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CcnfP51944 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.65■□□□□ 0.26
CcnfP51944 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.65■□□□□ 0.26
CcnfP51944 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CcnfP51944 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CcnfP51944 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.65■□□□□ 0.26
CcnfP51944 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CcnfP51944 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CcnfP51944 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CcnfP51944 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CcnfP51944 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.64■□□□□ 0.25
CcnfP51944 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CcnfP51944 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CcnfP51944 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.63■□□□□ 0.25
CcnfP51944 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.63■□□□□ 0.25
CcnfP51944 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.63■□□□□ 0.25
CcnfP51944 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.63■□□□□ 0.25
CcnfP51944 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CcnfP51944 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.63■□□□□ 0.25
CcnfP51944 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CcnfP51944 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CcnfP51944 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CcnfP51944 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CcnfP51944 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CcnfP51944 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CcnfP51944 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CcnfP51944 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CcnfP51944 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CcnfP51944 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CcnfP51944 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.62■□□□□ 0.25
CcnfP51944 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.62■□□□□ 0.25
CcnfP51944 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.62■□□□□ 0.25
CcnfP51944 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CcnfP51944 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CcnfP51944 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CcnfP51944 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.61■□□□□ 0.25
CcnfP51944 Dancr-204ENSMUST00000132389 2347 ntBASIC16.61■□□□□ 0.25
CcnfP51944 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.61■□□□□ 0.25
CcnfP51944 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.61■□□□□ 0.25
CcnfP51944 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CcnfP51944 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CcnfP51944 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CcnfP51944 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CcnfP51944 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CcnfP51944 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CcnfP51944 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms