Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HttP42859 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HttP42859 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HttP42859 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.78■□□□□ 0.6
HttP42859 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HttP42859 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HttP42859 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.78■□□□□ 0.6
HttP42859 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HttP42859 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
HttP42859 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HttP42859 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
HttP42859 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HttP42859 Gm5186-201ENSMUST00000218781 920 ntBASIC18.78■□□□□ 0.6
HttP42859 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HttP42859 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HttP42859 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
HttP42859 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HttP42859 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
HttP42859 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HttP42859 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HttP42859 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HttP42859 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.77■□□□□ 0.6
HttP42859 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HttP42859 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.77■□□□□ 0.6
HttP42859 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.77■□□□□ 0.6
HttP42859 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HttP42859 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HttP42859 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HttP42859 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HttP42859 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HttP42859 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HttP42859 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HttP42859 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HttP42859 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HttP42859 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.76■□□□□ 0.59
HttP42859 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HttP42859 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HttP42859 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HttP42859 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HttP42859 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HttP42859 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HttP42859 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HttP42859 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HttP42859 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HttP42859 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HttP42859 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HttP42859 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HttP42859 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.75■□□□□ 0.59
HttP42859 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HttP42859 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HttP42859 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HttP42859 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HttP42859 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
HttP42859 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HttP42859 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HttP42859 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HttP42859 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HttP42859 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HttP42859 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HttP42859 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.74■□□□□ 0.59
HttP42859 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HttP42859 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HttP42859 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HttP42859 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HttP42859 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
HttP42859 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HttP42859 Gm2213-201ENSMUST00000197485 688 ntBASIC18.74■□□□□ 0.59
HttP42859 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.74■□□□□ 0.59
HttP42859 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HttP42859 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HttP42859 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HttP42859 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HttP42859 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HttP42859 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HttP42859 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HttP42859 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.73■□□□□ 0.59
HttP42859 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HttP42859 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HttP42859 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.73■□□□□ 0.59
HttP42859 Gm12644-201ENSMUST00000119935 606 ntBASIC18.73■□□□□ 0.59
HttP42859 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HttP42859 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HttP42859 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HttP42859 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HttP42859 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HttP42859 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HttP42859 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
HttP42859 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HttP42859 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
HttP42859 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HttP42859 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HttP42859 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.72■□□□□ 0.59
HttP42859 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.72■□□□□ 0.59
HttP42859 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HttP42859 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.72■□□□□ 0.59
HttP42859 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HttP42859 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms