Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LdlrP35951 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LdlrP35951 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LdlrP35951 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LdlrP35951 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LdlrP35951 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LdlrP35951 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.4■□□□□ 0.38
LdlrP35951 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
LdlrP35951 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.4■□□□□ 0.38
LdlrP35951 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LdlrP35951 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LdlrP35951 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LdlrP35951 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LdlrP35951 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LdlrP35951 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.4■□□□□ 0.38
LdlrP35951 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LdlrP35951 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
LdlrP35951 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.39■□□□□ 0.37
LdlrP35951 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LdlrP35951 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.39■□□□□ 0.37
LdlrP35951 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.39■□□□□ 0.37
LdlrP35951 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.39■□□□□ 0.37
LdlrP35951 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LdlrP35951 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LdlrP35951 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
LdlrP35951 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LdlrP35951 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.38■□□□□ 0.37
LdlrP35951 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.38■□□□□ 0.37
LdlrP35951 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LdlrP35951 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.38■□□□□ 0.37
LdlrP35951 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.38■□□□□ 0.37
LdlrP35951 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.38■□□□□ 0.37
LdlrP35951 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LdlrP35951 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LdlrP35951 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LdlrP35951 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.37■□□□□ 0.37
LdlrP35951 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LdlrP35951 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LdlrP35951 Mir6982-201ENSMUST00000184354 68 ntBASIC17.37■□□□□ 0.37
LdlrP35951 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.37■□□□□ 0.37
LdlrP35951 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.37■□□□□ 0.37
LdlrP35951 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.37■□□□□ 0.37
LdlrP35951 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.37■□□□□ 0.37
LdlrP35951 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LdlrP35951 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
LdlrP35951 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.36■□□□□ 0.37
LdlrP35951 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.36■□□□□ 0.37
LdlrP35951 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LdlrP35951 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms