Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd40P27512 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd40P27512 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cd40P27512 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.83■□□□□ 0.12
Cd40P27512 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.83■□□□□ 0.12
Cd40P27512 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cd40P27512 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd40P27512 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Cd40P27512 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.82■□□□□ 0.12
Cd40P27512 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cd40P27512 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.82■□□□□ 0.12
Cd40P27512 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cd40P27512 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cd40P27512 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.82■□□□□ 0.12
Cd40P27512 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40P27512 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.81■□□□□ 0.12
Cd40P27512 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.81■□□□□ 0.12
Cd40P27512 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cd40P27512 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40P27512 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.81■□□□□ 0.12
Cd40P27512 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.81■□□□□ 0.12
Cd40P27512 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cd40P27512 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cd40P27512 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.8■□□□□ 0.12
Cd40P27512 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.8■□□□□ 0.12
Cd40P27512 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.8■□□□□ 0.12
Cd40P27512 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.8■□□□□ 0.12
Cd40P27512 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.8■□□□□ 0.12
Cd40P27512 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cd40P27512 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd40P27512 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.8■□□□□ 0.12
Cd40P27512 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cd40P27512 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.79■□□□□ 0.12
Cd40P27512 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd40P27512 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd40P27512 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd40P27512 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd40P27512 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd40P27512 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd40P27512 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.79■□□□□ 0.12
Cd40P27512 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cd40P27512 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd40P27512 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cd40P27512 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd40P27512 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd40P27512 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.78■□□□□ 0.12
Cd40P27512 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.78■□□□□ 0.12
Cd40P27512 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cd40P27512 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.78■□□□□ 0.12
Cd40P27512 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd40P27512 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms