Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Gm10418-201ENSMUST00000100943 576 ntBASIC15.69■□□□□ 0.1
Cd48P18181 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cd48P18181 Gm2399-201ENSMUST00000104944 225 ntBASIC15.69■□□□□ 0.1
Cd48P18181 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.69■□□□□ 0.1
Cd48P18181 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cd48P18181 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd48P18181 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cd48P18181 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd48P18181 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd48P18181 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd48P18181 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cd48P18181 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd48P18181 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cd48P18181 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd48P18181 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd48P18181 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd48P18181 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd48P18181 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd48P18181 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd48P18181 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd48P18181 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd48P18181 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd48P18181 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.68■□□□□ 0.1
Cd48P18181 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd48P18181 Gm7291-201ENSMUST00000199147 382 ntBASIC15.68■□□□□ 0.1
Cd48P18181 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd48P18181 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.68■□□□□ 0.1
Cd48P18181 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd48P18181 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cd48P18181 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.68■□□□□ 0.1
Cd48P18181 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.68■□□□□ 0.1
Cd48P18181 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd48P18181 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cd48P18181 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cd48P18181 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd48P18181 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd48P18181 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd48P18181 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd48P18181 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd48P18181 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd48P18181 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd48P18181 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd48P18181 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.67■□□□□ 0.1
Cd48P18181 Gm38285-201ENSMUST00000192928 922 ntBASIC15.67■□□□□ 0.1
Cd48P18181 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd48P18181 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd48P18181 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd48P18181 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd48P18181 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cd48P18181 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd48P18181 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd48P18181 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd48P18181 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd48P18181 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cd48P18181 Flg-201ENSMUST00000050758 1488 ntBASIC15.66■□□□□ 0.1
Cd48P18181 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cd48P18181 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Gm44549-201ENSMUST00000208351 577 ntBASIC15.66■□□□□ 0.1
Cd48P18181 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Cd48P18181 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cd48P18181 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd48P18181 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Cd48P18181 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd48P18181 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd48P18181 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd48P18181 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cd48P18181 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd48P18181 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cd48P18181 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd48P18181 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd48P18181 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Cd48P18181 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.65■□□□□ 0.1
Cd48P18181 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd48P18181 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.65■□□□□ 0.1
Cd48P18181 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd48P18181 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd48P18181 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd48P18181 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd48P18181 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd48P18181 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Cd48P18181 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cd48P18181 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms