Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp54P14576 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Srp54P14576 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp54P14576 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.16■□□□□ 0.34
Srp54P14576 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.16■□□□□ 0.34
Srp54P14576 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp54P14576 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp54P14576 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Srp54P14576 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp54P14576 Gm38027-201ENSMUST00000192315 235 ntBASIC17.16■□□□□ 0.34
Srp54P14576 Gm29791-202ENSMUST00000207888 369 ntBASIC17.16■□□□□ 0.34
Srp54P14576 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srp54P14576 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp54P14576 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Srp54P14576 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srp54P14576 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp54P14576 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.15■□□□□ 0.34
Srp54P14576 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp54P14576 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp54P14576 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp54P14576 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp54P14576 Gm13401-201ENSMUST00000117074 291 ntBASIC17.15■□□□□ 0.34
Srp54P14576 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Srp54P14576 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.15■□□□□ 0.34
Srp54P14576 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Srp54P14576 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Srp54P14576 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.15■□□□□ 0.34
Srp54P14576 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Srp54P14576 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.15■□□□□ 0.34
Srp54P14576 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp54P14576 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Srp54P14576 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp54P14576 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.15■□□□□ 0.34
Srp54P14576 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Srp54P14576 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Srp54P14576 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Srp54P14576 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Srp54P14576 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Srp54P14576 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.14■□□□□ 0.33
Srp54P14576 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srp54P14576 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Srp54P14576 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srp54P14576 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.14■□□□□ 0.33
Srp54P14576 Gm27463-201ENSMUST00000183569 57 ntBASIC17.14■□□□□ 0.33
Srp54P14576 Gm7889-201ENSMUST00000185591 958 ntBASIC17.14■□□□□ 0.33
Srp54P14576 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srp54P14576 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Srp54P14576 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srp54P14576 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.14■□□□□ 0.33
Srp54P14576 Rarb-207ENSMUST00000225921 2756 ntBASIC17.14■□□□□ 0.33
Srp54P14576 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Srp54P14576 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Srp54P14576 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srp54P14576 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srp54P14576 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Srp54P14576 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Srp54P14576 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.13■□□□□ 0.33
Srp54P14576 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Srp54P14576 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srp54P14576 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Srp54P14576 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.12■□□□□ 0.33
Srp54P14576 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Srp54P14576 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Srp54P14576 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp54P14576 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms