Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.77■□□□□ 0.28
Cntn1P12960 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cntn1P12960 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cntn1P12960 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cntn1P12960 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cntn1P12960 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.77■□□□□ 0.28
Cntn1P12960 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.77■□□□□ 0.28
Cntn1P12960 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cntn1P12960 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cntn1P12960 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cntn1P12960 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cntn1P12960 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cntn1P12960 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cntn1P12960 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cntn1P12960 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cntn1P12960 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cntn1P12960 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.76■□□□□ 0.27
Cntn1P12960 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cntn1P12960 Gm9987-201ENSMUST00000069768 567 ntBASIC16.76■□□□□ 0.27
Cntn1P12960 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.76■□□□□ 0.27
Cntn1P12960 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cntn1P12960 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.75■□□□□ 0.27
Cntn1P12960 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Cntn1P12960 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.75■□□□□ 0.27
Cntn1P12960 Gm11539-201ENSMUST00000119837 557 ntBASIC16.75■□□□□ 0.27
Cntn1P12960 Gm13436-201ENSMUST00000120418 567 ntBASIC16.75■□□□□ 0.27
Cntn1P12960 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cntn1P12960 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.75■□□□□ 0.27
Cntn1P12960 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.75■□□□□ 0.27
Cntn1P12960 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cntn1P12960 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cntn1P12960 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cntn1P12960 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cntn1P12960 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cntn1P12960 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cntn1P12960 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cntn1P12960 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cntn1P12960 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cntn1P12960 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cntn1P12960 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cntn1P12960 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cntn1P12960 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cntn1P12960 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cntn1P12960 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cntn1P12960 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.74■□□□□ 0.27
Cntn1P12960 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cntn1P12960 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.74■□□□□ 0.27
Cntn1P12960 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cntn1P12960 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Cntn1P12960 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.74■□□□□ 0.27
Cntn1P12960 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cntn1P12960 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.74■□□□□ 0.27
Cntn1P12960 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cntn1P12960 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cntn1P12960 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cntn1P12960 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cntn1P12960 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cntn1P12960 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cntn1P12960 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cntn1P12960 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cntn1P12960 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cntn1P12960 Gm6433-201ENSMUST00000118634 875 ntBASIC16.73■□□□□ 0.27
Cntn1P12960 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cntn1P12960 Gm38027-201ENSMUST00000192315 235 ntBASIC16.73■□□□□ 0.27
Cntn1P12960 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cntn1P12960 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cntn1P12960 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cntn1P12960 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cntn1P12960 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cntn1P12960 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cntn1P12960 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cntn1P12960 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cntn1P12960 Idnk-204ENSMUST00000226010 1898 ntBASIC16.72■□□□□ 0.27
Cntn1P12960 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms