Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC12.08□□□□□ -0.48
Smim1P0C8K7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.08□□□□□ -0.48
Smim1P0C8K7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.08□□□□□ -0.48
Smim1P0C8K7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim1P0C8K7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC12.07□□□□□ -0.48
Smim1P0C8K7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.07□□□□□ -0.48
Smim1P0C8K7 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.07□□□□□ -0.48
Smim1P0C8K7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smim1P0C8K7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.06□□□□□ -0.48
Smim1P0C8K7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smim1P0C8K7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smim1P0C8K7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms