Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PtcraP0C6B2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.17■□□□□ 0.02
PtcraP0C6B2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.17■□□□□ 0.02
PtcraP0C6B2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.17■□□□□ 0.02
PtcraP0C6B2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PtcraP0C6B2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PtcraP0C6B2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.16■□□□□ 0.02
PtcraP0C6B2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PtcraP0C6B2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.15■□□□□ 0.02
PtcraP0C6B2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.15■□□□□ 0.02
PtcraP0C6B2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.15■□□□□ 0.02
PtcraP0C6B2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PtcraP0C6B2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PtcraP0C6B2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Gm27011-201ENSMUST00000182352 972 ntBASIC15.14■□□□□ 0.01
PtcraP0C6B2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PtcraP0C6B2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms