Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.13■□□□□ 0.49
PrnpP04925 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
PrnpP04925 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.13■□□□□ 0.49
PrnpP04925 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.13■□□□□ 0.49
PrnpP04925 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.13■□□□□ 0.49
PrnpP04925 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PrnpP04925 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PrnpP04925 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PrnpP04925 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrnpP04925 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PrnpP04925 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PrnpP04925 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.12■□□□□ 0.49
PrnpP04925 Gm11950-201ENSMUST00000121615 838 ntBASIC18.12■□□□□ 0.49
PrnpP04925 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.12■□□□□ 0.49
PrnpP04925 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.12■□□□□ 0.49
PrnpP04925 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrnpP04925 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.11■□□□□ 0.49
PrnpP04925 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PrnpP04925 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.11■□□□□ 0.49
PrnpP04925 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrnpP04925 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PrnpP04925 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrnpP04925 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.11■□□□□ 0.49
PrnpP04925 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrnpP04925 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrnpP04925 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrnpP04925 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrnpP04925 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrnpP04925 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrnpP04925 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.1■□□□□ 0.49
PrnpP04925 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PrnpP04925 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrnpP04925 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrnpP04925 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrnpP04925 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PrnpP04925 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PrnpP04925 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.1■□□□□ 0.49
PrnpP04925 Gm28033-201ENSMUST00000184224 96 ntBASIC18.1■□□□□ 0.49
PrnpP04925 Gm18669-201ENSMUST00000216049 778 ntBASIC18.1■□□□□ 0.49
PrnpP04925 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PrnpP04925 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrnpP04925 Gm10566-201ENSMUST00000086739 996 ntBASIC18.1■□□□□ 0.49
PrnpP04925 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PrnpP04925 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrnpP04925 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PrnpP04925 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Golph3-205ENSMUST00000228671 2842 ntBASIC18.09■□□□□ 0.49
PrnpP04925 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PrnpP04925 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.09■□□□□ 0.49
PrnpP04925 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PrnpP04925 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PrnpP04925 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrnpP04925 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PrnpP04925 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PrnpP04925 Actl10-202ENSMUST00000226583 1501 ntBASIC18.08■□□□□ 0.49
PrnpP04925 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PrnpP04925 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PrnpP04925 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PrnpP04925 Gm18958-201ENSMUST00000174258 762 ntBASIC18.08■□□□□ 0.48
PrnpP04925 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.08■□□□□ 0.48
PrnpP04925 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PrnpP04925 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PrnpP04925 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PrnpP04925 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms