Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.63■□□□□ 0.09
Hdac3O88895 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hdac3O88895 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hdac3O88895 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Hdac3O88895 Tgds-204ENSMUST00000228543 1594 ntBASIC15.62■□□□□ 0.09
Hdac3O88895 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.62■□□□□ 0.09
Hdac3O88895 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Hdac3O88895 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.62■□□□□ 0.09
Hdac3O88895 Flg-201ENSMUST00000050758 1488 ntBASIC15.62■□□□□ 0.09
Hdac3O88895 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.62■□□□□ 0.09
Hdac3O88895 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Hdac3O88895 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.62■□□□□ 0.09
Hdac3O88895 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hdac3O88895 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Hdac3O88895 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.61■□□□□ 0.09
Hdac3O88895 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Hdac3O88895 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Hdac3O88895 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hdac3O88895 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hdac3O88895 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hdac3O88895 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hdac3O88895 Gm5408-201ENSMUST00000197998 747 ntBASIC15.61■□□□□ 0.09
Hdac3O88895 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hdac3O88895 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hdac3O88895 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Hdac3O88895 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hdac3O88895 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Hdac3O88895 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.61■□□□□ 0.09
Hdac3O88895 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hdac3O88895 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hdac3O88895 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hdac3O88895 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hdac3O88895 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 Gm38285-201ENSMUST00000192928 922 ntBASIC15.6■□□□□ 0.09
Hdac3O88895 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 Gm4968-201ENSMUST00000071458 858 ntBASIC15.6■□□□□ 0.09
Hdac3O88895 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.6■□□□□ 0.09
Hdac3O88895 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hdac3O88895 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hdac3O88895 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hdac3O88895 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Hdac3O88895 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hdac3O88895 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Hdac3O88895 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.59■□□□□ 0.09
Hdac3O88895 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Hdac3O88895 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.59■□□□□ 0.09
Hdac3O88895 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Zfp783-201ENSMUST00000095946 670 ntBASIC15.59■□□□□ 0.09
Hdac3O88895 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.59■□□□□ 0.09
Hdac3O88895 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.59■□□□□ 0.09
Hdac3O88895 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Hdac3O88895 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac3O88895 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hdac3O88895 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac3O88895 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.58■□□□□ 0.08
Hdac3O88895 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms