Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sema3fO88632 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sema3fO88632 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sema3fO88632 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3fO88632 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3fO88632 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3fO88632 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Sema3fO88632 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3fO88632 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.16■□□□□ 0.82
Sema3fO88632 Gm23634-201ENSMUST00000175071 91 ntBASIC20.16■□□□□ 0.82
Sema3fO88632 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3fO88632 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3fO88632 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.16■□□□□ 0.82
Sema3fO88632 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sema3fO88632 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3fO88632 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.15■□□□□ 0.82
Sema3fO88632 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Sema3fO88632 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.15■□□□□ 0.82
Sema3fO88632 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.15■□□□□ 0.82
Sema3fO88632 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
Sema3fO88632 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3fO88632 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Sema3fO88632 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sema3fO88632 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Sema3fO88632 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Sema3fO88632 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sema3fO88632 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sema3fO88632 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sema3fO88632 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sema3fO88632 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.14■□□□□ 0.81
Sema3fO88632 Mir8112-201ENSMUST00000184382 131 ntBASIC20.14■□□□□ 0.81
Sema3fO88632 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sema3fO88632 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sema3fO88632 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sema3fO88632 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sema3fO88632 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Sema3fO88632 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.13■□□□□ 0.81
Sema3fO88632 Gm10013-201ENSMUST00000106074 672 ntBASIC20.13■□□□□ 0.81
Sema3fO88632 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.13■□□□□ 0.81
Sema3fO88632 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.13■□□□□ 0.81
Sema3fO88632 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3fO88632 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3fO88632 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3fO88632 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Sema3fO88632 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Sema3fO88632 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3fO88632 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3fO88632 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3fO88632 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3fO88632 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3fO88632 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3fO88632 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.12■□□□□ 0.81
Sema3fO88632 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.12■□□□□ 0.81
Sema3fO88632 Gm9731-201ENSMUST00000209480 747 ntBASIC20.12■□□□□ 0.81
Sema3fO88632 Il3ra-202ENSMUST00000223589 738 ntBASIC20.12■□□□□ 0.81
Sema3fO88632 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3fO88632 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3fO88632 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sema3fO88632 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3fO88632 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Sema3fO88632 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.11■□□□□ 0.81
Sema3fO88632 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3fO88632 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3fO88632 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3fO88632 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.11■□□□□ 0.81
Sema3fO88632 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3fO88632 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3fO88632 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3fO88632 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3fO88632 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3fO88632 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3fO88632 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sema3fO88632 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sema3fO88632 Gm16061-201ENSMUST00000122167 857 ntBASIC20.1■□□□□ 0.81
Sema3fO88632 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sema3fO88632 Gm6345-202ENSMUST00000180900 204 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms