Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc3O88196 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc3O88196 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc3O88196 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc3O88196 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc3O88196 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc3O88196 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc3O88196 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.35■□□□□ 0.53
Ttc3O88196 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc3O88196 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ttc3O88196 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc3O88196 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc3O88196 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc3O88196 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc3O88196 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ttc3O88196 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.35■□□□□ 0.53
Ttc3O88196 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc3O88196 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ttc3O88196 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ttc3O88196 Ank2-226ENSMUST00000189368 339 ntBASIC18.35■□□□□ 0.53
Ttc3O88196 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Ttc3O88196 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc3O88196 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc3O88196 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc3O88196 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc3O88196 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc3O88196 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc3O88196 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.34■□□□□ 0.53
Ttc3O88196 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc3O88196 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc3O88196 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ttc3O88196 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc3O88196 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc3O88196 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ttc3O88196 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.33■□□□□ 0.53
Ttc3O88196 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.33■□□□□ 0.53
Ttc3O88196 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ttc3O88196 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ttc3O88196 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ttc3O88196 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ttc3O88196 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ttc3O88196 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ttc3O88196 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.33■□□□□ 0.52
Ttc3O88196 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.33■□□□□ 0.52
Ttc3O88196 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.33■□□□□ 0.52
Ttc3O88196 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc3O88196 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.32■□□□□ 0.52
Ttc3O88196 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ttc3O88196 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ttc3O88196 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ttc3O88196 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc3O88196 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.31■□□□□ 0.52
Ttc3O88196 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.31■□□□□ 0.52
Ttc3O88196 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc3O88196 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc3O88196 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc3O88196 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc3O88196 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.31■□□□□ 0.52
Ttc3O88196 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc3O88196 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc3O88196 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc3O88196 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc3O88196 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc3O88196 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ttc3O88196 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc3O88196 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ttc3O88196 Actl10-202ENSMUST00000226583 1501 ntBASIC18.3■□□□□ 0.52
Ttc3O88196 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc3O88196 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc3O88196 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc3O88196 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc3O88196 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc3O88196 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc3O88196 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc3O88196 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.3■□□□□ 0.52
Ttc3O88196 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc3O88196 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc3O88196 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms