Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp8O70138 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp8O70138 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Mmp8O70138 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp8O70138 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp8O70138 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.33■■□□□ 1.01
Mmp8O70138 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp8O70138 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.33■■□□□ 1.01
Mmp8O70138 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.33■■□□□ 1.01
Mmp8O70138 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp8O70138 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp8O70138 Gm43808-201ENSMUST00000202534 2065 ntBASIC21.33■■□□□ 1
Mmp8O70138 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.33■■□□□ 1
Mmp8O70138 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Mmp8O70138 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mmp8O70138 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.33■■□□□ 1
Mmp8O70138 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.32■■□□□ 1
Mmp8O70138 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp8O70138 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
Mmp8O70138 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp8O70138 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp8O70138 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.32■■□□□ 1
Mmp8O70138 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.32■■□□□ 1
Mmp8O70138 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp8O70138 Gm10252-201ENSMUST00000209541 832 ntBASIC21.32■■□□□ 1
Mmp8O70138 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.32■■□□□ 1
Mmp8O70138 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp8O70138 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp8O70138 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp8O70138 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp8O70138 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.32■■□□□ 1
Mmp8O70138 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp8O70138 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.31■■□□□ 1
Mmp8O70138 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp8O70138 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp8O70138 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp8O70138 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp8O70138 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.31■■□□□ 1
Mmp8O70138 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mmp8O70138 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.31■■□□□ 1
Mmp8O70138 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp8O70138 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp8O70138 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp8O70138 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.3■■□□□ 1
Mmp8O70138 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp8O70138 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp8O70138 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp8O70138 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mmp8O70138 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.3■■□□□ 1
Mmp8O70138 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.29■■□□□ 1
Mmp8O70138 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.29■■□□□ 1
Mmp8O70138 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Mmp8O70138 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp8O70138 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC21.28■■□□□ 1
Mmp8O70138 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp8O70138 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mmp8O70138 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.28■■□□□ 1
Mmp8O70138 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Mmp8O70138 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp8O70138 Gm37055-201ENSMUST00000191866 133 ntBASIC21.28■■□□□ 1
Mmp8O70138 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp8O70138 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp8O70138 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp8O70138 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp8O70138 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
Mmp8O70138 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Mmp8O70138 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp8O70138 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp8O70138 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.27■■□□□ 1
Mmp8O70138 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.27■■□□□ 1
Mmp8O70138 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp8O70138 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.27■■□□□ 1
Mmp8O70138 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.27■■□□□ 1
Mmp8O70138 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp8O70138 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp8O70138 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Mmp8O70138 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.27■■□□□ 1
Mmp8O70138 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Mmp8O70138 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Mmp8O70138 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Mmp8O70138 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.26■□□□□ 0.99
Mmp8O70138 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp8O70138 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp8O70138 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp8O70138 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp8O70138 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms