Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.56■□□□□ 0.24
Rdh5O55240 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.56■□□□□ 0.24
Rdh5O55240 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.56■□□□□ 0.24
Rdh5O55240 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.55■□□□□ 0.24
Rdh5O55240 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.55■□□□□ 0.24
Rdh5O55240 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 Gm11643-201ENSMUST00000119578 864 ntBASIC16.55■□□□□ 0.24
Rdh5O55240 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 Gm18666-201ENSMUST00000190039 958 ntBASIC16.55■□□□□ 0.24
Rdh5O55240 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Rdh5O55240 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.55■□□□□ 0.24
Rdh5O55240 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.55■□□□□ 0.24
Rdh5O55240 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh5O55240 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rdh5O55240 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Rdh5O55240 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.54■□□□□ 0.24
Rdh5O55240 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.54■□□□□ 0.24
Rdh5O55240 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.54■□□□□ 0.24
Rdh5O55240 Gm10252-201ENSMUST00000209541 832 ntBASIC16.54■□□□□ 0.24
Rdh5O55240 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rdh5O55240 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.54■□□□□ 0.24
Rdh5O55240 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rdh5O55240 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh5O55240 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rdh5O55240 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh5O55240 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh5O55240 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh5O55240 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Rdh5O55240 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh5O55240 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh5O55240 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh5O55240 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.53■□□□□ 0.24
Rdh5O55240 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.53■□□□□ 0.24
Rdh5O55240 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.53■□□□□ 0.24
Rdh5O55240 Mir8112-201ENSMUST00000184382 131 ntBASIC16.53■□□□□ 0.24
Rdh5O55240 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh5O55240 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh5O55240 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh5O55240 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Rdh5O55240 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rdh5O55240 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rdh5O55240 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh5O55240 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh5O55240 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh5O55240 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh5O55240 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh5O55240 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh5O55240 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rdh5O55240 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh5O55240 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh5O55240 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh5O55240 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh5O55240 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh5O55240 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.52■□□□□ 0.24
Rdh5O55240 Gm18025-201ENSMUST00000221733 862 ntBASIC16.52■□□□□ 0.24
Rdh5O55240 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Rdh5O55240 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.52■□□□□ 0.23
Rdh5O55240 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rdh5O55240 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rdh5O55240 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rdh5O55240 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.51■□□□□ 0.23
Rdh5O55240 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh5O55240 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh5O55240 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.51■□□□□ 0.23
Rdh5O55240 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh5O55240 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh5O55240 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms