Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Smarce1O54941 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smarce1O54941 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Smarce1O54941 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarce1O54941 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smarce1O54941 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smarce1O54941 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarce1O54941 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.8■□□□□ 0.92
Smarce1O54941 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.79■□□□□ 0.92
Smarce1O54941 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Smarce1O54941 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Smarce1O54941 Gm26524-201ENSMUST00000192339 390 ntBASIC20.79■□□□□ 0.92
Smarce1O54941 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.79■□□□□ 0.92
Smarce1O54941 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.79■□□□□ 0.92
Smarce1O54941 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarce1O54941 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.78■□□□□ 0.92
Smarce1O54941 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.78■□□□□ 0.92
Smarce1O54941 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.78■□□□□ 0.92
Smarce1O54941 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarce1O54941 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.78■□□□□ 0.92
Smarce1O54941 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarce1O54941 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Smarce1O54941 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarce1O54941 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarce1O54941 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.77■□□□□ 0.92
Smarce1O54941 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarce1O54941 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smarce1O54941 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Smarce1O54941 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Smarce1O54941 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.77■□□□□ 0.92
Smarce1O54941 Mir2861-201ENSMUST00000175539 82 ntBASIC20.77■□□□□ 0.92
Smarce1O54941 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Smarce1O54941 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Smarce1O54941 Rab3c-203ENSMUST00000224180 967 ntBASIC20.77■□□□□ 0.92
Smarce1O54941 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Smarce1O54941 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarce1O54941 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarce1O54941 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarce1O54941 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.77■□□□□ 0.92
Smarce1O54941 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Smarce1O54941 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarce1O54941 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Smarce1O54941 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarce1O54941 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarce1O54941 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarce1O54941 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Smarce1O54941 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarce1O54941 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarce1O54941 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.76■□□□□ 0.91
Smarce1O54941 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarce1O54941 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Smarce1O54941 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarce1O54941 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarce1O54941 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarce1O54941 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.75■□□□□ 0.91
Smarce1O54941 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smarce1O54941 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarce1O54941 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.75■□□□□ 0.91
Smarce1O54941 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.75■□□□□ 0.91
Smarce1O54941 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smarce1O54941 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Smarce1O54941 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarce1O54941 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarce1O54941 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarce1O54941 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarce1O54941 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarce1O54941 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarce1O54941 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Smarce1O54941 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarce1O54941 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarce1O54941 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Smarce1O54941 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarce1O54941 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarce1O54941 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarce1O54941 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.74■□□□□ 0.91
Smarce1O54941 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms